PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G303600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 234aa    MW: 25453.6 Da    PI: 10.3322
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G303600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.53.1e-05112157454
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        ++  r r R +++ ++++ L++l+ +      +K + a++L +A+ YI+ L
  Aqcoe6G303600.1.p 112 TKTVRVRVRKEKLGDRIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 157
                        56788899******************8.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-12108169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.678108157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.01E-5111162No hitNo description
Gene3DG3DSA:4.10.280.102.7E-8112166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0041114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MATTKEEFAK NPISSMGNFI YPSSITTTFP SGNVPTMLCF NTNSENQKYR VLNGSESLSG  60
SSSNNSSSSS TITKSKRSRA GKGNTEQETK NLGSVESKKT IKKTKTGNPT STKTVRVRVR  120
KEKLGDRIAA LQQLVSPFGK TDTASVLHEA MGYIRFLHDQ VQVLSSPYLQ GLPSSNNFIQ  180
DARGEEEVKR RYDLKSRGLC LVPIECTTQV ASSNGADFWS PATMGSNILN LKH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271336.16e-64PREDICTED: transcription factor bHLH113
SwissprotQ9LT677e-47BH113_ARATH; Transcription factor bHLH113
TrEMBLA0A151U7S77e-61A0A151U7S7_CAJCA; Transcription factor bHLH113 family
STRINGGLYMA20G26630.15e-55(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-45bHLH family protein